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Articles in Volume 3
Database    
Protein sequence database for pathogenic arenaviruses
Huynh-Hoa Bui, Jason Botten, Nicolas Fusseder, Valerie Pasquetto, Bianca Mothe, Michael J Buchmeier, Alessandro Sette
Immunome Research 2007, 3:1 (8 February 2007)
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Research    
A novel strategy for the identification of antigens that are recognised by bovine MHC class I restricted cytotoxic T cells in a protozoan infection using reverse vaccinology
Simon P Graham, Yoshikazu Honda, Roger Pellé, Duncan M Mwangi, E Jane Glew, Etienne P de Villiers, Trushar Shah, Richard Bishop, Pierre van der Bruggen, Vishvanath Nene, Evans LN Taracha
Immunome Research 2007, 3:2 (9 February 2007)
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Software    
EpitopeViewer: a Java application for the visualization and analysis of immune epitopes in the Immune Epitope Database and Analysis Resource (IEDB)
John E Beaver, Philip E Bourne, Julia V Ponomarenko
Immunome Research 2007, 3:3 (21 February 2007)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Database    
ImmTree: Database of evolutionary relationships of genes and proteins in the human immune system
Csaba Ortutay, Markku Siermala, Mauno Vihinen
Immunome Research 2007, 3:4 (21 March 2007)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research    
Strength in numbers: achieving greater accuracy in MHC-I binding prediction by combining the results from multiple prediction tools
Brett Trost, Mik Bickis, Anthony Kusalik
Immunome Research 2007, 3:5 (24 March 2007)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Database    
IDR knowledge base for primary immunodeficiencies
Crina Samarghitean, Jouni Väliaho, Mauno Vihinen
Immunome Research 2007, 3:6 (29 March 2007)
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Research    
In silico characterization of immunogenic epitopes presented by HLA-Cw*0401
Joo Chuan Tong, Zong Hong Zhang, J Thomas August, Vladimir Brusic, Tin Wee Tan, Shoba Ranganathan
Immunome Research 2007, 3:7 (20 August 2007)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research    
Using the natural evolution of a rotavirus-specific human monoclonal antibody to predict the complex topography of a viral antigenic site
Brett A McKinney, Nicole L Kallewaard, James E Crowe Jr, Jens Meiler
Immunome Research 2007, 3:8 (18 September 2007)
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Methodology    
Amino acid biophysical properties in the statistical prediction of peptide-MHC class I binding
Surajit Ray, Thomas B Kepler
Immunome Research 2007, 3:9 (29 October 2007)
[Abstract] [Full Text] [PDF] [PubMed] [Related articles] [Cited on BioMed Central]

Research    
An analysis of the epitope knowledge related to Mycobacteria
Martin J Blythe, Qing Zhang, Kerrie Vaughan, Romulo de Castro Jr, Nima Salimi, Huynh-Hoa Bui, David M Lewinsohn, Joel D Ernst, Bjoern Peters, Alessandro Sette
Immunome Research 2007, 3:10 (14 December 2007)
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